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Federated Department of Biological Sciences

Physician Assistant

The program is open to all students with a GPA of 3.0 or better, who can complete the expedited undergraduate curriculum in three years; which is similar to other accelerated curricula offered by the Department.

The curriculum includes the required and recommended courses for the PA program and has been approved by Rutgers School of Health Related Professions and NJIT.

       


Physical Therapy 

There are two options for students wishing to pursue becoming a physical therapist. Both options are joint programs with Rutgers School of Health Related Professions and lead to a Doctor of Physical Therapy (DPT).

The first is an accelerated six-year program which is administered by NJIT's Albert Dorman Honors College. This program is open to high school seniors applying to NJIT. Students in this program would have to follow an accelerated curriculum and all requirements specified by the Honors College.

The second option is a standard four-year undergraduate curriculum followed by the DPT program at Rutgers. Students in this program must maintain a 3.0 GPA or better and complete all necessary prerequisites for physical therapy. All requirements can be incorporated into either the BA or BS in Biology.

 


Premedical and Health Education at NJIT

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FALL 2017 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Profs. Maria Stanko & Mary Konsolaki
BIOL 200H Concepts in Biology Honors Prof. John Yarotsky 
BIOL 205-001 Foundations of Biology: Ecology and Evolution Lecture Profs. Caroline DeVan 
BIOL 205-003 Foundations of Biology: Ecology and Evolution Lecture Profs. Caroline DeVan
BIOL 206 Foundations of Biology: Ecology and Evolution Lecture Lab Prof. John Yarotsky
BIOL 222 Evolution Prof. Daniel Bunker
BIOL 285 Comparative Vertebrate Anatomy Prof. Brooke Flammang- Lockye
BIOL 315 Principles of Neurobiology Prof. Jorge Golowasch
BIOL 320 Discovering Biological Research Profs. Simon Garnier & Phillip Barden
BIOL ​338 Ecology of the Dining Hall Prof. Maria Stanko
BIOL 341 Introduction to Neurophysiology Prof. Dirk Bucher
BIOL 352 Genetics Adjunct Prof. Thomas Pietri
BIOL 368 Ecology & Evolution of Disease Prof. Gareth Russell
BIOL 383 Neural Basis of Behavior Prof. Gal Haspel
BIOL 383H Neural Basis of Behavior Honors Prof. Gal Haspel
BIOL 385H Evolution of Animal Behavior Lab Honors Adjunct Prof. Caroline DeVan
BIOL 400 Biology in Science Fiction Prof. John Yarotsky
BIOL 448H Neuropathophysiology- Honors Prof. Darshan Desai
BIOL 475H Ecological Field Methods & Analysis Honors Prof. Maria Stanko
BIOL 630 Critical Thinking for the Life Sciences Prof. Farzan Nadim
BIOL 640 Cellular Neurophysiology Prof. Dirk Bucher

  

SUMMER 2017 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Prof. Maria Stanko
BIOL 205 Foundations of Biology: Ecology and Evolution Lecture Prof. Andrew Mashintonio
BIOL 206 Foundations of Biology: Ecology and Evolution Lab Prof. Andrew Mashintonio​
BIOL 340 Mammalian Physiology Prof. John Yarotsky
BIOL 375 Conservation Biology Prof. Caroline DeVan
BIOL 475H Ecological Field Methods & Analysis Honors Prof. Maria Stanko

  

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SPRING 2017 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Profs. Maria Stanko & Mary Konsolaki
BIOL 205-002 Foundations of Biology: Ecology and Evolution Lecture Prof. Caroline DeVan
BIOL 205-004 Foundations of Biology: Ecology and Evolution Lecture Prof. Caroline DeVan
BIOL 205H Foundations of Biology: Ecology and Evolution - Honors Prof. Caroline DeVan
BIOL 206 Foundations of Biology: Ecology and Evolution Lecture Lab Prof. John Yarotsky
BIOL 315 Principles of Neurobiology Prof. Jorge Golowasch
BIOL 337 Collective Intelligence Prof. Simon Garnier
BIOL 340 Mammalian Physiology Prof. John Yarotsky
BIOL ​344 Physiological Mechanisms Prof. Mary Konsolaki
BIOL ​345 Comparative Physiology​ Prof. Daphne Soares
BIOL 347 Lab Approaches in Neuroscience Prof. Dirk Bucher
BIOL 350 Immunology Prof. John Yarotsky
BIOL 375 Conservation Biology Prof. Gareth Russell
BIOL 375H Conservation Biology - Honors Prof. Maria Stanko
BIOL 440H Honors Cell Biology of Disease: Cells Gone Bad! Prof. Darshan Desai
BIOL 447 Systems Neurobiology Prof. Farzan Nadim
BIOL 447H Systems Neurobiology - Honors Prof. Farzan Nadim
BIOL 462 Comparative Biomechanics Prof. Brooke Flammang
BIOL 475H Ecological Field Methods & Analysis Honors Prof. Maria Stanko
BIOL 495 Seminar in Biology - Honors Prof. Mary Konsolaki

  

Course-Section Number Course Name Instructor
BIOL 612 Comparative Animal Physiology Prof. Daphne Soares
BIOL 638 Computational Ecology Prof. Gareth Russell
BIOL 641 Systems Neuroscience Prof. Farzan Nadim
BIOL 645 Biological Imaging Techniques Prof. Gal Haspel

  

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FALL 2016 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Profs. Maria Stanko & Mary Konsolaki
BIOL 200H Concepts in Biology Honors Prof. Eric Fortune 
BIOL 205-001 Foundations of Biology: Ecology and Evolution Lecture Profs. Caroline DeVan & Daphne Soares
BIOL 205-003 Foundations of Biology: Ecology and Evolution Lecture Profs. Caroline DeVan & Daphne Soares
BIOL 206 Foundations of Biology: Ecology and Evolution Lecture Lab Prof. John Yarotsky
BIOL 222 Evolution Prof. Daniel Bunker
BIOL 285 Comparative Vertebrate Anatomy Prof. Brooke Flammang- Lockye
BIOL 315 Principles of Neurobiology Prof. Jorge Golowasch
BIOL 320 Discovering Biological Research Profs. Simon Garnier & Mary Konsolaki
BIOL ​338 Ecology of the Dining Hall Prof. Maria Stanko
BIOL 341 Introduction to Neurophysiology Prof. Dirk Bucher
BIOL 368 Ecology & Evolution of Disease Prof. Gareth Russell
BIOL 375 Conservation Biology Prof. Gareth Russell
BIOL 383 Neural Basis of Behavior Prof. Gal Haspel
BIOL 383H Neural Basis of Behavior Honors Prof. Gal Haspel
BIOL 385H Evolution of Animal Behavior Lab Honors Adjunct Prof. Lisa O'Bryan
BIOL 400 Biology in Science Fiction Prof. John Yarotsky
BIOL 448H Neuropathophysiology- Honors Prof. Darshan Desai
BIOL 475H Ecological Field Methods & Analysis Honors Prof. Maria Stanko

  

Course-Section Number Course Name Instructor
BIOL 630 Critical Thinking for the Life Sciences Prof. Farzan Nadim
BIOL 640 Cellular Neurophysiology Prof. Dirk Bucher

  

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SUMMER 2016 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Prof. Maria Stanko
BIOL 205 Foundations of Biology: Ecology and Evolution Lecture Prof. Andrew Mashintonio
BIOL 206 Foundations of Biology: Ecology and Evolution Lab Prof. Andrew Mashintonio​
BIOL 340 Mammalian Physiology Prof. John Yarotsky
BIOL 375 Conservation Biology Prof. Andrew Mashintonio
BIOL 475H Ecological Field Methods & Analysis Honors Prof. Maria Stanko

  

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SYLLABUS ARCHIVE:

  

Spring 2016 Semester Spring 2015 Semester Spring 2014 Semester Spring 2013 Semester Spring 2012 Semester Spring 2011 Semester Fall 2015 Semester Fall 2014 Semester Fall 2013 Semester Fall 2012 Semester Fall 2011 Semester Fall 2010 Semester Summer 2015 Semester

  

 

 

 

 

  

 


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SPRING 2016 SEMESTER

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Profs. Caroline Devan & Andrew Mashintonio
BIOL 205-002
BIOL 205-004
Foundations of Biology: Ecology and Evolution Lecture Prof. Ellen Wisner
BIOL 205H Foundations of Biology: Ecology and Evolution Lecture Honors Prof. Ellen Wisner
BIOL 206 Foundations of Biology: Ecology and Evolution Lab Prof. Caroline Devan
BIOL 315 Principles of Neurobiology Prof. Jorge Golowasch
BIOL 337 Collective Intelligence Prof. Simon Garnier
BIOL 340 Mammalian Physiology Prof. John Yarotsky
BIOL 344 Physiological Mechanisms Prof. John Yarotsky
BIOL 350 Immunology Prof. John Yarotsky
BIOL 375 Conservation Biology Prof. Andrew Mashintonio
BIOL 375H Conservation Biology Honors Prof. Maria Stanko
BIOL 440H Honors Cell Biology of Disease: Cells Gone Bad! Prof. Darshan Desai
BIOL 447 Systems Neurobiology Prof. Farzan Nadim
BIOL 447H Systems Neurobiology Honors Prof. Farzan Nadim
BIOL 475H Ecological Field Methods and Analysis Honors Prof. Maria Stanko
BIOL 495-002

BIOL 495-004

Honors Seminar in Biology Profs. Maria Stanko & Eric Fortune

  

Course-Section Number Course Name Instructor
BIOL 638 Computational Ecology Prof. Gareth Russell
BIOL 641 Systems Neuroscience Prof. Farzan Nadim
BIOL 698-002 Selected Topics in Biology: Bio-Inspired Robotics Prof. Brooke Flammang
BIOL 698-004 Selected Topics in Biology: Advanced Imaging Techniques Prof. Gal Haspel

  

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FALL 2015 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Profs. Maria Stanko & Caroline Devan
BIOL 200H Concepts in Biology Honors Profs. Eric Fortune & Brooke Flammang
BIOL 205-001

BIOL 205-003

Foundations of Biology: Ecology and Evolution Lecture Prof. Ellen Wisner
BIOL 206 Foundations of Biology: Ecology and Evolution Lecture Lab Prof. Andrew Mashintonio
BIOL 222 Evolution Prof. Daniel Bunker
BIOL 315 Principles of Neurobiology Prof. Jorge Golowasch
BIOL 320 Discovering Biological Research Profs. Simon Garnier & Daphne Soares
BIOL 338 Ecology of the Dining Hall Prof. Maria Stanko
BIOL 341 Introduction to Neurophysiology Prof. Dirk Bucher
BIOL 375 Conservation Biology Prof. Gareth Russell
BIOL 383 Neural Basis of Behavior Prof. Gal Haspel
BIOL 383H Neural Basis of Behavior Honors Prof. Gal Haspel
BIOL 385H Evolution of Animal Behavior Lab Honors Prof. Ellen Wisner
BIOL 400 Biology in Science Fiction Prof. John Yarotsky
BIOL 448H Neuropathophysiology: Nervous System Gone Bad! Prof. Darshan Desai
BIOL 475H Ecological Field Methods & Analysis Honors Prof. Maria Stanko

  

Course-Section Number Course Name Instructor
BIOL 630 Critical Thinking for the Life Sciences Prof. Farzan Nadim
BIOL 698 Selected Topics in Biology: Neurobiology Prof. Dirk Bucher
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SUMMER 2015 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Prof. Maria Stanko
BIOL 205 Foundations of Biology: Ecology and Evolution Lecture Prof. Ellen Wisner
BIOL 206-021

BIOL 206-023

Foundations of Biology: Ecology and Evolution Lab Prof. Ellen Wisner
BIOL 475H Ecological Field Methods & Analysis Honors Prof. Maria Stanko
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SPRING 2015 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Profs. Maria Stanko & Eric Fortune
BIOL 205-002 Foundations of Biology: Ecology and Evolution Lecture Prof. Ellen Wisner

BIOL 205-004

Foundations of Biology: Ecology and Evolution Lecture Prof. Ellen Wisner
BIOL 205-H02 Foundations of Biology: Ecology and Evolution Lecture Honors Prof. Ellen Wisner
BIOL 206 Foundations of Biology: Ecology and Evolution Lab Prof. John Yarotsky
BIOL 315-002 Principles of Neurobiology Prof. Jorge Golowasch
BIOL 337-002 Collective Intelligence

Prof. Simon Garnier

BIOL 340 Mammalian Physiology Prof. Christopher Trimby
BIOL 344-002 Physiological Mechanisms Prof. Christopher Trimby
BIOL 350-002 Immunology Prof. John Yarotsky
BIOL 375-002 Conservation Biology Prof. Maria Stanko
BIOL 375-H02 Conservation Biology Honors Prof. Maria Stanko
BIOL 440-H02 Honors Cell Biology of Disease: Cells gone Bad! Prof. Darshan Desai
BIOL 445-002 Endocrinology Prof. John Yarotsky
BIOL 447-002 Systems Neurobiology Prof. Farzan Nadim
BIOL 447-H02 Systems Neurobiology Honors Prof. Farzan Nadim
BIOL 475-H02 Ecological Field Methods and Analysis Prof. Maria Stanko
BIOL 495-H02 Honors Seminar in Biology Prof. Gareth Russell

   

Course-Section Number Course Name Instructor
BIOL 612-002 Comparative Animal Physiology Prof. Daphne Soares
BIOL 641-002 Systems Neuroscience Prof. Farzan Nadim
BIOL 698-002 Selected Topics in Biology: Bio-Inspired Robotics Prof. Brooke Flammang
BIOL 698-004 Selected Topics in Biology: Physiology and Imaging Profs. Dirk Bucher & Gal Haspel
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FALL 2014 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number Course Name Instructor
BIOL 200 Concepts in Biology Profs. Maria Stanko & Christopher Trimby
BIOL 200H Concepts in Biology Honors Prof. Eric Fortune
BIOL 205-001 Foundations of Biology: Ecology and Evolution Lecture Prof. Ellen Wisner
BIOL 205-003 Foundations of Biology: Ecology and Evolution Lecture Prof. Ellen Wisner
BIOL 206 Foundations of Biology: Ecology and Evolution Lab Prof. John Yarotsky
BIOL 206-H01 Foundations of Biology: Ecology and Evolution Lab Honors Prof. John Yarotsky
BIOL 222-001 Evolution Prof. Daniel Bunker
BIOL 315-001 Principles of Neurobiology Prof. Jorge Golowasch
BIOL 320 Discovering Biological Research Profs. Brooke Flammang & Simon Garnier
BIOL 338-001 Ecology of the Dining Hall Prof. Maria Stanko
BIOL 341-001 Introduction to Neurophysiology Prof. Dirk Bucher
BIOL 368-H01 The Ecology and Evolution of Disease Honors Prof. Gareth Russell
BIOL 383-001 Neural Basis of Behavior Prof. Brooke Flammang
BIOL 383-H01 Neural Basis of Behavior Honors Prof. Gal Haspel
BIOL 385-H01 Evolution of Animal Behavior Lab Honors Prof. Ellen Wisner
BIOL 448-H01 Neuropathophysiology Prof. Darshan Desai
BIOL 475-H01 Ecological Field Methods & Analysis Honors Prof. Maria Stanko

   

Course-Section Number Course Name Instructor
BIOL 628-001 Cell Biology of Disease Prof. Christopher Trimby
BIOL 630 Critical Thinking for the Life Sciences Profs. Farzan Nadim & Daniel Bunker
BIOL 698-101 ST: Darwin's Voyage of the Beagle Prof. Daphne Soares
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SPRING 2014 SEMESTER:

Click on the Course-Section Number to access the course syllabus:

Course-Section Number

 

 

 

 

Our program in biology is designed to provide the scholarly basis for a lifetime of learning and discovery in biology.  Our students use their knowledge in a wide range of careers, including:

  • Environmental Protection
  • Public Health Inspector or Analyst
  • Physical or Occupational Therapist
  • Biomedical Scientist
  • Occupational Health and Safety
  • Pharmacist
  • Regulatory Compliance
  • Nutritionist
  • Epidemiologist
  • Criminologist/Forensic scientist
  • Physician Assistant
  • Professor
  • Nurse
  • Research Scientist

Our department is a remarkable group of dedicated researcher scientists and educators. We share a passion for discovery and for teaching in the biological sciences. 

The success of our students is at the core of our mission. NJIT biology professors work with our talented and motivated students to reveal fundamental processes that govern the living world. These insights are born from interactions that start in the classroom, but extend to the laboratory where faculty and students work together to solve persistent questions in biology. These experiences provide the basis for the long-term success of our students, as they continue their studies in medical school, graduate school, and in their professional endeavors.

Our family of scientists study a broad range of fascinating questions in biology, from the function of individual molecules in brain cells, the mechanics of swimming, to the collective behavior of ants as they navigate complex habitats. Our close colleagues at Rutgers Newark — who are across the street and open their labs to NJIT students — extend the range of research to include questions related to human health, such as epigenetic mechanisms of cancer and how changes in the brain can lead to Alzheimer’s and Parkinson’s disease. 

If you would like to know more about us, our program, and what to expect when you are here, please take a look at the resources we’ve posted on the Biology website and the websites of our faculty.  And please don’t hesitate to get in touch if you have any questions! 

This page is a work in progress, It is intended to hold information about student organizations and clubs, as well as advice on topics such as how to get involved in research. Some content will be student-created.

 

Students in other majors can choose to Minor in Biology in order to broaden their exposure to the sciences.  The minor must be declared by the semester preceding graduation.  Students should complete an Application to Change Major/Minor/Concentration form.

-Tessy Thomas is a chemistry major minoring in biology.

Required Courses   

Currently the Minor in Biology requires 12 credits of core courses and 10 credits of elected concept cluster courses in Biology. Therefore, Biology Minors are required to complete a total of 22 credits minimum to fulfill the minor requirement. Declared minors should reference the proper time frame and follow the required associated courses as specified below.

 

I.    Required Core Courses  [12 credits]

  • BIOL 200 - Concepts in Biology  [4]

  • BIOL 201 - Foundations of Cell and Molecular Biology Lecture  [3]

  • BIOL 202 - Foundations of Cell and Molecular Biology Laboratory  [1]

  • BIOL 205 - Foundations of Ecology and Evolution Lecture  [3]

  • BIOL 206 - Foundations of Ecology and Evolution Laboratory  [1]
    ·

II.   Concept Cluster Courses [10 credits]. Minors must complete one course from each of the following three concept cluster categories:
·

      A. » Ecological and Evolutionary Framework  [3 credits]

  • BIOL 222 or  R120:222- Evolution  [3]

  • BIOL 280  or R120:282 

  • BIOL 382 - Animal Behavior  [3]

  • R120:370 - Plant Ecology  [3]
    ·

      B. » The Functional Organism [4 credits]

  • R120:211 - Plant Kingdom   [4]

  • R120:230 - Biology of Seed Plants  [4]

  • R120:335 - Microbiology  [4]

  • R120:330 - Plant Physiology  [4]

  • BIOL 340 or R120:340 - Mammalian Physiology  [4]

·

      C. » Molecular and Cellular Mechanisms  [3 credits]

  • BIOL 352 or R120:352 - Genetics  [3]

  • R120:355 - Cell Biology  [3]

  • R120:356 - Molecular Biology  [3]

  • CHEM 473 or R120:360 - Biochemistry  [3]
    ·


 

The Department of Biological Sciences has introduced the following new courses in recent semesters. Please note that not all courses are offered each semester: please check the NJIT course schedule to see which courses are coming up. If you are interested in a course and would like to know when it will next be offered, please see your academic advisor.

BIOL 250: Biology of Neotropical Habitats: Ecuador and Galápagos Islands

EcuadorPrerequisite: Students must interview with the instructor and have his/her permission. This course is an introduction to tropical biology and evolution held in Ecuador's Highlands, Rain Forest, and in the Galápagos Islands. The course will concentrate on using a hands-on approach to study the flora and fauna of these unique habitats. The course also addresses the history, politics, and culture of Ecuador, with emphasis on how these issues influence the management and sustainability of Ecuadorian natural resources.  Effective: Spring 2019

BIOL 432:  Introduction to Computational Neuroscience

BIOL 432
Prerequisites: MATH 222; BIOL 315; BNFO 135 or CS101 or CS100 or CS115 (grade C or better in all prerequisites), or permission by instructor. Introduction to the modeling, computational and analysis techniques for single neurons and small neuronal networks. This course will approach cellular and small network neuroscience beginning with a review and understanding of outstanding problems in neuroscience. The course work will then focus on students developing an independent modeling/computational project around which neuroscience concepts will be discussed. The required knowledge of electric circuits and numerical tools for the solution of differential equations will be introduced as needed.  Effective: Fall 2019

BIOL 436: Advanced Neuroscience Modeling

Prerequisites: BIOL 432 or MATH 430 or permission by instructor. Modeling and computational analysis of biological neuronal networks. The course consists of lectures, and scientific paper presentations aimed at acquiring a clear understanding of the biological issues in systems neuroscience. Students will work on developing an independent modeling/computational project during the duration of the semester around which biological topics will be discussed.  Effective From: Spring 2019

BIOL 470: Dynamic Principles in Systems Biology

Prerequisites: MATH 222 , and BNFO 135 or CS100 or CS115 grade C or better, or permission by instructor. Introduction to the dynamic and computational modeling of biological systems, including chemical, biochemical, metabolic and genetic networks. The course includes the description of basic principles and case studies and provides the necessary mathematical and computational tools to understand the mechanisms underlying the dynamics of this type of networks. The necessary knowledge on the biology will be introduced during the course.  Effective From: Fall 2019

From the activity of neurons in our brains that determine everything we sense and do, to the ecosystems that provide the resources necessary for our survival, the biological world determines the nature of our existence. The study of biology is the key to understanding ourselves and the world in which we live, and has the potential to improve the lives of people everywhere.

Faculty and student biologists at NJIT work together to advance our understanding of the living world. For many of our students, this work forms the foundation for their careers in medicine. Their hard-won knowledge of biology prepares them for the challenges of improving people’s lives through the delivery of health care, through improvements in treatment strategies, and through advances in our basic understanding of human biology and disease. Many other students use their skills to make contributions in critical fields such as conservation, sustainability, urban planning, education, and through basic research.

The Department of Biological Sciences is committed the advancement of our students and scientific knowledge. We are proud that our diverse faculty, staff, and students come from different backgrounds, representing a wide range of cultural and social perspectives and experiences, which enhances everything we do. 

Third Annual Research Showcase, April 11, 2007


Swetha Basani
“The Effect of Mercuric Ion APTT on PT Clotting Tests”
Advisor Professor Charles Spillert, New Jersey Medical School

Mercuric ion (Hg2+) has been found to increase coagulant activity in whole blood. We conducted an in vitro study to determine whether mercuric chloride (HgCl2) has an effect on blood coagulation when added to whole blood solutions containing either PT or APTT reagent. We used 10 µl of 10% PT reagent and 10 µl of 10% APTT reagent and added them to separate solutions of 990 µl of human citrated whole blood (CWB). Mercuric chloride was added to each reagent sample and compared to the samples containing only reagent. The incubation period was 5 minutes at 37ºC. The blood clotting time was measured in seconds using a Sonoclot Coagulation Analyzer. PT and HgCl2 resulted in no change in clotting time when compared to that of just PT. APTT, in combination with HgCl2, resulted in a significant reduction in clotting time when compared to that of just APTT (p<0.01). The data in this study suggests that HgCl2 and APTT concurrently stimulate coagulation.

Krystian F. Jarosz
“Assessing Genetic Susceptibility to Early Onset Periodontitis”  
Advisor Professor S. Diehl, New Jersey Dental School

Aggressive periodontitis is a rare destructive disease of the periodontal tissue that occurs in young individuals. Recently there has been an increased amassing of evidence for a genetic susceptibility to this classification of periodontal disease. This study aims to explore such a hypothesis of genetically programmed disease-genes via genotyping with SNP genetic markers. The study incorporates reaction plate preparation, assay operation, reading of the genotype, and lastly statistical analysis of obtained findings. Studies such as this are performed with the broad intention of future genetic therapy applications such as the preparation of personalized drugs that may ameliorate disease symptoms, or prevent disease altogether.

Jasneet Kaur and Tao Lin ( Math) 
“Impact of Constitutively Active RhoA and Change in Cell Shape on Mitotic Spindle Orientation”
Advisors Professor Amitabha Bose and Professor Edward Bonder

The orientation of the mitotic spindle in a cell determines the cleavage plane for cytokinesis. Expression of constitutively active RhoA, a member of Rho GTPase family that is involved in signaling the rearrangement of actin cytoskeleton, has been observed to lead to a rounded cell shape as well as the misorientation of the mitotic spindle. In this report, we have examined the relationship between the change in cell shape caused by RhoA and the misorientation of the mitotic spindle. Normal IAR-2 rat liver epithelial cells, RhoA activated IAR-2 cells, and RhoA activated IAR-2 cells treated with several different concentrations of Y-27632, a highly potent, cell-permeable, selective inhibitor of Rho-associated protein kinase, were observed by confocal microscopy. This inhibitory action of Y-27632 relaxes actin-myosin contraction and allows the cell shape of the RhoA activated cells to return to normal. As a result, the relationship between cell shape and spindle orientation can be studied by analyzing the shapes and spindle angles of the different cells. From the data, it was concluded that the change in cell shape caused by the effect of constitutively active RhoA did not directly lead to a misoriented spindle. We propose that the reduction in amount of cortical flow as a result of over expression of RhoA has a more significant role in regulating the mitotic spindle orientation. Through mathematical modeling we show that the effect of cell shape is minimal compared to the effect of cortical flow in determining the angle of the mitotic spindle.

Olga Khorkova, PhD Student in Biology
“Long-Term Effects of Neuromodulatory Input on Ionic Current Interactions”
Advisor Jorge Golowasch

Reliability of respiration, heartbeat and digestion depends on the stability of output (bursting activity) of the central pattern generators (CPGs) controlling these functions. The bursting activity in turn depends on the characteristics of the ionic currents expressed by CPG neurons. Here we show that CPG neurons with different functions (e.g. pacemaker vs follower neurons) have distinct regulation of their currents levels and of their correlations. We further demonstrate that neurons with different functions respond differently during adaptation to changes in environmental inputs, such as the loss of neuromodulator supply after decentralization of crab stomatogastric ganglion (STG). Such differences could be essential for the simultaneous maintenance of stable output of single neurons and CPG networks under constantly changing environmental conditions.

Samin Nawaz 
“Structural Insights into Hydrolytic Mechanism of Antibiofilm Agent Dispersin B”
Advisor Dr. N. Ramasubbu, New Jersey Dental School

Bacteria in a biofilm are enmeshed in a self-synthesized extracellular polysaccharide matrix (PGA) which is a linear polymer of N-acetylglucosamine residues in β(1,6)-linkage. Dispersin B (DspB), a soluble glycoside hydrolase produced by Actinobacillus actinomycetemcomitans (Aa) degrades PGA. DspB, is an (β/α) TIM-barrel protein and belongs to family 20 glycosyl hydrolases in which a conserved amino acid pair, aspartate-glutamate, is present (Asp183-Glu184, DspB numbering). In addition, the active site of DspB contains another acidic residue Glu332 at about 5Å away from Glu184. Objective: To understand the role of each of these acidic residues in the hydrolytic mechanism.

Methods: Using site-directed mutagenesis, biological and biochemical characterization, we investigated the role of Asp183, Glu184 and Glu332. Results: We found that Glu184 and Glu332 residues are essential for DspB activity. Mutation of each of these causes a significant reduction in the enzymatic activity. The variant Glu184Gln requires a 10-fold increase in enzyme concentration (>1000 nM) for measurable activity in kinetic as well as biofilm assay whereas Glu332Gln is inactive even at 1000 nM. In contrast, both DspB and Asp183Ala exhibited similar kinetics at 100 nM concentration; however, Asp183Ala showed a 12-fold loss in activity compared to DspB. Similar results were obtained in a 96-well biofilm detachment assay as well.

Conclusion: The loss of activity in the Glu184 and Glu332 variants suggests that DspB might hydrolyze PGA through a mechanism similar to the substrate-assisted mechanism proposed earlier. Based on our results, it appears that Asp183, Glu184 and Glu332 play a significant role in the hydrolysis of PGA.

Roshan Prabhu
“Temperature Dependency of Circadian Clocks in Drosophila”
Advisor Professor Issac Edery, Rutgers-New Brunswick

The circadian clock, an internal biological clock, allows, among other things, an organism to adjust its daily activity patterns by sensing changes in environmental queues such as light/dark (LD) cycles and temperature. Splicing of the Drosophila melanogaster period (per) intron 8 (dmpi8) in the 3’UTR has been associated with temperature sensitivity of circadian clocks in Drosophila. High splicing efficiency is linked with early evening activity peak and low splicing efficiency with later mainly nocturnal evening activity peaks in D. melanogaster (Canton-S; a strain originating from N. America). Cold temperatures are associated with high splicing efficiency and warm temperatures with low splicing efficiency. This makes biological sense by providing a mechanism whereby flies avoid the hot midday hours during warm days.  The SR proteins sc35, srp54, nop5, xl6, rbp1, sf2 may play a role in splicing regulation, however, silencing expression of a single protein at a time showed no affect. Silencing multiple related proteins at a time may be the key to determining the role of these SR proteins in splicing regulation of dmpi8.

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